This lesson is being piloted (Beta version)

Introduction to data analysis with R and Bioconductor: Glossary

Key Points

Data organisation with Spreadsheets
  • Good data organization is the foundation of any research project.

R and RStudio
  • Start using R and RStudio

Introduction to R
  • How to interact with R

Starting with data
  • Tabular data in R

Manipulating and analyzing data with dplyr
  • Tabular data in R using the tidyverse meta-package

Data visualization
  • Visualization in R

Joining tables
  • Join tables of data in R

Next steps
  • SummarizedExperiment represents an efficient way to store and to handle omics data

  • SummarizedExperiment is used in many Bioconductor packages

  • We can use tidySummarizedExperiment to interact with SummarizedExperiment objects using tidyverse commands

Bioconductor
  • Bioconductor collates interoperable packages for analyses of biological data.

  • Using biocView can help you to find packages for a specific topic.

Glossary

FIXME